Thorsten Meinl

projects

Parallel search in molecular databases
Director: Philippsen, M.
Coworker: Wörlein, M.; Dreweke, A.; Meinl, T.

Lectures

WS 2005/2006

SS 2005

WS 2004/2005

SS 2004

Publications

  1. Dreweke, A.; Wörlein, M.; Fischer, I.; Schell, D.; Meinl, T.; Philippsen, M.: Graph-Based Procedural Abstraction. In: IEEE (Ed.): Proc. of the 2007 CGO (The Fifth International Symposium on Code Generation and Optimization, San Jose, CA, USA). Los Alamitos, CA, USA: IEEE Computer Society, 2007, pp. 259-270. - ISBN 0-7695-2764-7 (BibTeX)
  2. Wörlein, M.; Dreweke, A.; Meinl, T.; Fischer, I.; Philippsen, M.: Edgar: the Embedding-baseD GrAph MineR. In: Gärtner, T.; Garriga, G.; Meinl, T. (Ed.): Proceedings of the International Workshop on Mining and Learning with Graphs (International Workshop on Mining and Learning with Graphs, Berlin)., 2006, pp. 221-228 (BibTeX)
  3. Meinl, T.; Wörlein, M.; Fischer, I.; Philippsen, M.: Mining Molecular Datasets on Symmetric Multiprocessor Systems. In: IEEE (Ed.): Proceedings of the 2006 IEEE International Conference on Systems, Man and Cybernetics (2006 IEEE International Conference on Systems, Man and Cybernetics, Taipei, Taiwan)., 2006, pp. 1269-1274 (BibTeX)
  4. Meinl, T.; Wörlein, M.; Urzova, O.; Fischer, I.; Philippsen, M.: The ParMol Package for Frequent Subgraph Mining. In: Electronic Communications of the EASST (ISSN: 1863-2122) Volume 1 (2006) No. 1 pp. 1-12 (BibTeX)
  5. Meinl, T.; Wörlein, M.; Urzova, O.; Fischer, I.; Philippsen, M.: The ParMol package for frequent subgraph mining. In: Zündorf, A.; Varro, D. (Ed.): Third International Workshop on Graph Based Tools (Third International Workshop on Graph Based Tools, Natal, Brasil)., 2006, pp. 94-105 (BibTeX)
  6. Wörlein, M.; Meinl, T.; Fischer, I.; Philippsen, M.: A quantitative comparison of the subgraph miners MoFa, gSpan, FFSM, and Gaston. In: Jorge, A.; Torgo, L.; Brazdil, P.; Camacho, R.; Gama, J. (Ed.): Knowledge Discovery in Database: PKDD 2005 (9th European Conference on Principles and Practices of Knowledge Discovery in Databases, Porto, Portugal).Vol. 3721 Berlin: Springer, 2005, pp. 392-403, Lecture Notes in Computer Sciencevol. 3721. - ISBN 3-540-29244-6 (BibTeX)
  7. Borgelt, C.; Meinl, T.; Berthold, M.: MoSS: A Program for Molecular Substructure Mining. In: Goethals, B.; Nijssen, S.; Zaki, M. (Ed.): Proceedings of OSDM 2005 (Open Source Data Mining Workshop on Frequent Pattern Mining Implementations, Chicago, IL, USA)., 2005, pp. 6-15 (BibTeX)
  8. Meinl, T.; Fischer, I.; Philippsen, M.: Parallel Mining for Frequent Fragments on a Shared-Memory Multiprocessor -Results and Java-Obstacles-. In: Bauer, M.; Kröner, A.; Brandherm, B. (Ed.): LWA 2005 - Beiträge zur GI-Workshopwoche Lernen, Wissensentdeckung, Adaptivität (Workshop der GI-Fachgruppe "Maschinelles Lernen, Wissensentdeckung, Data Mining" (FGML), Saarbrücken, Germany)., 2005, pp. 196-201 (BibTeX)
  9. Nijssen, S.; Meinl, T.; Karypis, G. (Ed.): Proceedings of MGTS 2005.3rd International Workshop on Mining Graphs, Trees and Sequences, Porto, Portugal.2005 (BibTeX)
  10. Meinl, T.; Fischer, I.: Subgraph Mining. In: Wang, J. (Ed.): Encyclopedia of Data Warehousing and Mining, Hershey, PA, USA: Idea Group, 2005, pp. 1059-1063 (BibTeX)
  11. Borgelt, C.; Meinl, T.; Berthold, M.: Advanced Pruning Strategies to Speed Up Mining Closed Molecular Fragments. In: Thissen, W.; Wieringa, P.; Pantic, M.; Ludema, M. (Ed.): IEEE SMC 2004 Conference Proceedings (2004 IEEE Conference on Systems, Man & Cybernetics, Den Haag, The Netherlands)., 2004, pp. 4565-4570. - ISBN 0-7803-8567-5 (BibTeX)
  12. Meinl, T.; Borgelt, C.; Berthold, M.: Discriminative Closed Fragment Mining and Pefect Extensions in MoFa. In: Onaindia, E.; Staab, S. (Ed.): STAIRS 2004 - Proceedings of the Second Starting AI Researchers' Symposium (STAIRS 2004, Valencia, Spain).Vol. 109 Amsterdam: IOS Press, 2004, pp. 3-14, Frontiers in Artificial Intelligence and Applicationsvol. 109. - ISBN 1-58603-451-0 - ISSN 0922-6389 (BibTeX)
  13. Meinl, T.: Erweiterte Fragmentsuche in Moleküldatenbanken. Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Diploma thesis, 2004. - 78 pages (BibTeX)
  14. Fischer, I.; Meinl, T.: Graph Based Molecular Data Mining - An Overview. In: Thissen, W.; Wieringa, P.; Pantic, M.; Ludema, M. (Ed.): IEEE SMC 2004 Conference Proceedings (2004 IEEE Conference on Systems, Man & Cybernetics, Den Haag, The Netherlands)., 2004, pp. 4578-4582. - ISBN 0-7803-8567-5 (BibTeX)
  15. Meinl, T.; Berthold, M.: Hybrid Fragment Mining with MoFa and FSG. In: Thissen, W.; Wieringa, P.; Pantic, M.; Ludema, M. (Ed.): IEEE SMC 2004 Conference Proceedings (2004 IEEE International Conference on Systems, Man & Cybernetics, Den Haag, The Netherlands)., 2004, pp. 4559-4564. - ISBN 0-7803-8567-5 (BibTeX)
  16. Meinl, T.; Borgelt, C.; Berthold, M.: Mining fragments with fuzzy chains in molecular databases. In: Kok, J.; Washio, T. (Ed.): Proceedings of the Workshop W7 on Mining Graphs, Trees and Sequences (MGTS '04) (ECML/PKDD 2004, Pisa, Italy)., 2004, pp. 49-60 (BibTeX)

Supervised theses

Finished theses

  1. Marc Wörlein: Erweiterung und Parallelisierung eines Graph-Mining-Algorithmus.[DT]
    Advisors: Fischer, I.; Meinl, T.; Philippsen, M.: submitted on March 31, 2006
  2. Olga Urzova: Zweidimensionale Visualisierung von Molekülgraphen in Java.[SP]
    Advisors: Meinl, T.; Fischer, I.; Philippsen, M.: submitted on October 10, 2005
  3. Monic Klöden: Vergleich von Algorithmen zur Fragmentsuche in Moleküldatenbanken - Teil 1.[SP]
    Advisors: Meinl, T.; Fischer, I.; Philippsen, M.: submitted on July 5, 2005
  4. Marc Wörlein: Vergleich von Algorithmen zur Fragmentsuche in Moleküldatenbanken (gSPan/Gaston).[SP]
    Advisors: Meinl, T.; Fischer, I.; Philippsen, M.: submitted on June 8, 2005
  5. Thomas Stark: Entwicklung und Implementierung einer Anwendung zur Verwaltung eines Testcenters für Client-Anwendungen.[SP]
    Advisors: Meinl, T.; Fischer, I.; Philippsen, M.: submitted on September 17, 2004
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